Insertion junction: CLIP2.035353_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035353
Chromosome:chromosome 2
Location:4388721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105550 (1 of 1) IPR000104//IPR003008 - Antifreeze protein, type I // Tubulin/FtsZ, GTPase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATCAAAAGGTGCTGTCGGGCGCGGACGTGGCGGCACATACGCTGGAGG
Internal bar code:CGGAACAAAAGTGTTTTTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2744
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCCACCTCAAGTGTCAC
Suggested primer 2:GGTGCACGCTAACAAGCAAA