Insertion junction: CLIP2.035372_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035372
Chromosome:chromosome 14
Location:3485749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630600 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCAGCCTGGGCCAGAGGCTGCTGCTGAAGGATTGTGATAAGTTGCT
Internal bar code:AAACTTGAGCGATACACATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCACTTTCCCCGTTTGC
Suggested primer 2:CTGCAACTTCCACATGGCAC