Insertion junction: CLIP2.035386_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035386
Chromosome:chromosome 1
Location:867095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004900 Similar to Putatative Protease/Amidase; (1 of 1) PTHR11019//PTHR11019:SF1//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATTATTGCCACCAGCTGTGACAAGATTGGTGATGAGCCTACCGGCGC
Internal bar code:CGACCTTACAGATACATGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1152
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTTGTCCGGAGAGCCAA
Suggested primer 2:ACTCGCAACCTGGGTTAGTG