Insertion junction: CLIP2.035396_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035396
Chromosome:chromosome 2
Location:6363813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAGAGCGCTGCGGCCGCGCACGGCGTTGCCGCTGGCTCCACCGACGG
Internal bar code:TGAGATATACAGGATAATCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCAACGGCAGTAACGAC
Suggested primer 2:CGTGTTATCGGCATGGCTTG