Insertion junction: CLIP2.035401_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035401
Chromosome:chromosome 6
Location:3903897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278190 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTGTGGCGTCAATCCGCCAGCAGCAAAGTGGTGGGCTGGGGTGGCGG
Internal bar code:GTGAGAAATTTGTGACCACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACTGCACACACCTCAGC
Suggested primer 2:CTCAGCCCACAGTCGACAAT