Insertion junction: CLIP2.035402_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035402
Chromosome:chromosome 9
Location:2970500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393321 CSR12 (1 of 6) 2.8.2.33 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase / GalNAc4S-6ST; Carbohydrate sulfotransferase-related 12 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGGGCCTTATCCCCTGCTGTGTCGGGCGTGCCTAGGGGTGAGCGTGT
Internal bar code:TAGAAGCGTGGGAAGTTTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGGAGGGGTTAGCTCTG
Suggested primer 2:CCTCCCAATTGCCGTAACCT