Insertion junction: CLIP2.035416_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035416
Chromosome:chromosome 11
Location:1171778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467681 (1 of 6) PF00787 - PX domain (PX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGTGGTTGAGCTGGACCACAGACAGCGCAGCCTAGTGGTACTGTTGA
Internal bar code:TGACGCTCAAGAACTGCATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAGGAGGAGGCTAGGGA
Suggested primer 2:GCTCGCCACAGTTCAAATCC