Insertion junction: CLIP2.035420_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035420
Chromosome:chromosome 9
Location:3248170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTGCCTGTGCGCCATGTCGTCCGTGTATGAGCGTATAACGTCCGCGC
Internal bar code:TGTATAAGAGAAGGGCGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCCTCCCCAGCTTCTTC
Suggested primer 2:CCTTTGGCGTTCACCCTAGT