Insertion junction: CLIP2.035436_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035436
Chromosome:chromosome 14
Location:1508479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617700 PDE1,PDE2 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATTTCGCACACCCCGGCCTCACCGGTGACTTCCTCATCGCCTCCTCCG
Internal bar code:TGGTTTACTTGATTAAGGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1844
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCAGGGAACTCACTTCT
Suggested primer 2:GATTGCCTATGGGAGACGGG