Insertion junction: CLIP2.035442_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035442
Chromosome:chromosome 16
Location:1159289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650350 (1 of 1) PF03457 - Helicase associated domain (HA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCTGCTCGCCTACGGCAGCCGTTCACGTGCAACCCCTTCGCCGCCC
Internal bar code:GAGTTTGGGCATAGTTCGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3318
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGACATGGCGTATTGCTG
Suggested primer 2:ACCTTCATGTCCAGCAGTCG