Insertion junction: CLIP2.035454_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035454
Chromosome:chromosome 2
Location:4847669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109366 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTACCGCCGCTCGTGACACCGGCACGTGCACTGTAGGTTGCGGCGA
Internal bar code:GGAAAGGTCCGCCTTAATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1677
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATAAACACACGCCCCGA
Suggested primer 2:TCCTTAGTCGCCTGCCTAGT