Insertion junction: CLIP2.035456_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035456
Chromosome:chromosome 6
Location:2704238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAATCCTCCTCCCCCCCGCCCTTACGACGTGCAGGAGCGGCTCTTGA
Internal bar code:GACGTTTGGCGGAGGGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1164
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACCATATTGCGGTGCATGG
Suggested primer 2:AAAGTCAAACTGGGGCCCAA