Insertion junction: CLIP2.035456_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035456
Chromosome:chromosome 6
Location:2704244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGATTGTAAGGGGGGGTTGACTGCGCGGGTGCACAAGGTGCAATCA
Internal bar code:GACGTTTGGCGGAGGGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1710
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTCAAACTGGGGCCCAA
Suggested primer 2:CACCATATTGCGGTGCATGG