Insertion junction: CLIP2.035463_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035463
Chromosome:chromosome 2
Location:3329437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097850 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCAGCATCGCCGCCGGCGCCATCCGCGCCGTCAGCCCCTGGGCATGC
Internal bar code:GGATCGGTGAGTTGTCGCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1844
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGGATGCGGAAGATG
Suggested primer 2:ACAACGTACGCTTGGTTTGC