Insertion junction: CLIP2.035479_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035479
Chromosome:chromosome 12
Location:9028140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATGCCTTGATGAGTTGGAGGGCGCGCCGCCACCCGCTGCTGCTGCCG
Internal bar code:AGGTGCCTGGGGAAGTCACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:6.34921
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGACAGACGGAGACCAAC
Suggested primer 2:ACCTGCCATTGAGTACAGCC