Insertion junction: CLIP2.035480_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035480
Chromosome:chromosome 4
Location:1985487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218950 (1 of 1) IPR001841//IPR002110//IPR013083//IPR020683 - Zinc finger, RING-type // Ankyrin repeat // Zinc finger, RING/FYVE/PHD-type // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCGGAGGGTGGTGAGTCAGAACGCTGAGTCAGGACCACCACACCG
Internal bar code:TAGCAAGGAGGTTTCAGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCACCACCCTAAAAGGCG
Suggested primer 2:TCTCTGAGCTACCCGACGAA