Insertion junction: CLIP2.035480_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035480
Chromosome:chromosome 4
Location:1985488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218950 (1 of 1) IPR001841//IPR002110//IPR013083//IPR020683 - Zinc finger, RING-type // Ankyrin repeat // Zinc finger, RING/FYVE/PHD-type // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAACCACGCAGGAGTTGTGCCTGCGGCCCTGCCCACACCGGCTGTGC
Internal bar code:CCTCTTGCCCGGAACCGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2532
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTGAGCTACCCGACGAA
Suggested primer 2:ATCCACCACCCTAAAAGGCG