Insertion junction: CLIP2.035483_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035483
Chromosome:chromosome 12
Location:3157920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500450 TPD1 (1 of 2) PTHR12121:SF37 - 2',5'-PHOSPHODIESTERASE 12; 2'%252C5'-phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGGAGGGCAGGAGGTGGGGAGAGGCTGGGCGTGGCGGTAGCGGGTGG
Internal bar code:ACCCATCTGGTACAGTGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:288
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCGATGGAGATCTGCAA
Suggested primer 2:AGGAACGATTGCACGACTGT