Insertion junction: CLIP2.035485_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035485
Chromosome:chromosome 1
Location:6700918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047850 (1 of 1) 4.2.1.145 - Capreomycidine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCCATCGGGGGCAGGCGCGTGTGTTTTTCGGCCTAGCCTTCACAGGA
Internal bar code:GTATGTTAGTGGGGGTCAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:43
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGGCGGGGGATAAAAAC
Suggested primer 2:GCCACGTGTTGACAGTGAAC