Insertion junction: CLIP2.035490_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035490
Chromosome:chromosome 2
Location:3395455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098500 (1 of 12) PF04749 - PLAC8 family (PLAC8) intron
Cre02.g098550 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAAAGAGCGACGAGTCCTTTCGGTGGTGAGGCATGCTGGCAGCGACT
Internal bar code:TCCACAGATAATCCGTAAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2588
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCTGCTCATGTGACTC
Suggested primer 2:ACGGTCTTGCGTGTATGTGT