Insertion junction: CLIP2.035498_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035498
Chromosome:chromosome 3
Location:8084642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201150 (1 of 2) 2.5.1.117 - Homogentisate solanesyltransferase / HST CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTCGCGGACACACGCCCTGCGCCCCACTCGCCCGCGGTGCTGGCTG
Internal bar code:CTTTCCTGCGTAGGTGCGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2219
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCCGTATTGCTGCAGG
Suggested primer 2:TCACATCACTGCTGGTCCAC