Insertion junction: CLIP2.035499_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035499
Chromosome:chromosome 9
Location:5950573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412175 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCAGGCTCATCGCCGCCACCGCCGCCGCCGCCGCCAAACAAGGCCAG
Internal bar code:TGTTATCATACAAAAAATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGCATCGGCAGCAGTA
Suggested primer 2:GCACTACCACCACCACTACC