Insertion junction: CLIP2.035506_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035506
Chromosome:chromosome 17
Location:1867480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709550 (1 of 2) K06709 - jumonji domain-containing protein 2 [EC:1.14.11.-] (JMJD2, JHDM3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCCCATCTGCCTCCTGGCAGTTACTTCTTGCATCTGCACGCCCTGCG
Internal bar code:TGCGGGCGTGTCCGATCCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTTGCTGTCGTCGTTG
Suggested primer 2:CTCGGTCAACTTCCTGCACT