Insertion junction: CLIP2.035511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035511
Chromosome:chromosome 1
Location:8183223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g070567 (1 of 1) PTHR14440:SF7 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGCTGGTGGCTGGCACCAGCAGTTTAGCGCTCCAAATGCGGCGCTGA
Internal bar code:TCTTAGGAGTGTTTAAAACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4251
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTAACTTGGGCTGGAT
Suggested primer 2:CCTCACCTGGATTGTGCCAT