Insertion junction: CLIP2.035526_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035526
Chromosome:chromosome 10
Location:5973681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461350 BUG23 Basal-body proteins with upregulated genes 23 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCTCGTACCGCAGCGCCATCAGTGCCTTGGCGGCCTCGTCGCTCTTG
Internal bar code:AACGCATAAATGACTACAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3419
LEAP-Seq percent confirming:99.1736
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGGACGCGGAGGTAGGA
Suggested primer 2:CGGCAAAAGCAAACACAGGA