Insertion junction: CLIP2.035526_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035526
Chromosome:chromosome 10
Location:5973693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461350 BUG23 Basal-body proteins with upregulated genes 23 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGAGATGCCGTACCTGCGGGAGGGGGCTGGGAGCTGCGGGTTGTTGG
Internal bar code:TTCGTTCGATAGCGGTTTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAAAAGCAAACACAGGA
Suggested primer 2:TAAAGGACGCGGAGGTAGGA