Insertion junction: CLIP2.035528_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035528
Chromosome:chromosome 15
Location:371876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00212865

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAATTTTAACAGTTGTGCCGAAGCACGTCAATTCTCATAGGCCAAATA
Internal bar code:AGGATAGTTAAGCTAAGTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2131
LEAP-Seq percent confirming:97.6471
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATCACGCTGTGCCATTG
Suggested primer 2:GATGAACACCAGGCTCACGA