Insertion junction: CLIP2.035534_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035534
Chromosome:chromosome 7
Location:270897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313950 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATCGGGTTTGGTTTAGTTTGGGCTGGTATTTACAACCCCCCTTTATC
Internal bar code:ACGCCCGAGCACGCCGCCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2548
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTGGGCATGAGACCTC
Suggested primer 2:TGTCACTGGCGTAGTTAGCG