Insertion junction: CLIP2.035542_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035542
Chromosome:chromosome 10
Location:6405051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464450 (1 of 2) PF00651//PF07707 - BTB/POZ domain (BTB) // BTB And C-terminal Kelch (BACK) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTGCCGGTGAGGCGTTGCTGAGGGGTAGCGGGTGTGAAGCGCTGG
Internal bar code:GATGAGTAGCGCACAAGACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1691
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACGGTGATGCTGACGAC
Suggested primer 2:TCAAAGAAGCAGTCCGGGTC