Insertion junction: CLIP2.035544_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035544
Chromosome:chromosome 2
Location:28157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g073150 (1 of 1) IPR001841//IPR029071 - Zinc finger, RING-type // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGCCCTCGCTGCCCTCGCAGACTAGCGCCCCTGGCGCCGCCTGGCGC
Internal bar code:GGCGAGCGAAACTGCCGTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2832
LEAP-Seq percent confirming:54.7619
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACGGCCTTTCATCTTCT
Suggested primer 2:TTTCCCACCTGCAGTGTGTT