Insertion junction: CLIP2.035546_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035546
Chromosome:chromosome 5
Location:2970225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGGCGGCGGCCGCGCGGCCGGCCGACGCCTTGGAGCGACTGCGGTG
Internal bar code:TGGGTGCCGGCTACCCATAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1236
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCACGCACGTGTGTTT
Suggested primer 2:GCTGCTGGCAATGATCCATG