Insertion junction: CLIP2.035546_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035546
Chromosome:chromosome 5
Location:2970226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGCACTTGCCTCCAGGCCGCCGCGCACGCCCCGCAAGACCTGGTCA
Internal bar code:ATGTTAGAATTTGAGTAAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5447
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGGCAATGATCCATG
Suggested primer 2:CATGTCACGCACGTGTGTTT