Insertion junction: CLIP2.035549_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035549
Chromosome:chromosome 7
Location:503307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315850 (1 of 2) IPR000104//IPR000945//IPR020683 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCAAACTGTTGGTCGCCATTTGAACACGCACCTGCACACCTCGGCGC
Internal bar code:CATGGAGTCGTGTTGTAAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:41.8079
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:103
LEAP-Seq n unique pos:177

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCGCAAAAGGAGAGTAC
Suggested primer 2:CTGGTTTTGTGCCACTGAGC