Insertion junction: CLIP2.035557_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035557
Chromosome:chromosome 1
Location:3360416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021800 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTGAGGGTGGTGGGCTGGTGGAGGGGGAAGCAGGGGGCAGGGCAGA
Internal bar code:GACATGATTTTCCTATAGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACACACAAGCACTCC
Suggested primer 2:AGTTTGTACCCACCGAGCAG