Insertion junction: CLIP2.035558_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035558
Chromosome:chromosome 5
Location:2723781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240450 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGTTGAGCCCCACGAGCATGTCCTCCTGCTGGTCGGTGAAGTGCTG
Internal bar code:TAGGGAGAGAACGACAAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1471
LEAP-Seq percent confirming:82.0896
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGGTGAGCTGAACATT
Suggested primer 2:GTCGCCGCTCAGCTAAATTG