Insertion junction: CLIP2.035579_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035579
Chromosome:chromosome 7
Location:4380245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340950 AXL4 (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN; Arabinose chain extension enzyme like protein 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGGTCACCGCCAAGGCCGGCCTGACCGCGGCGGCGCACGAGCCCGG
Internal bar code:ACTTTGGATTCAGGAAGACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:496
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGGTTGGGCGAGATGG
Suggested primer 2:GTTTGAGAACCCGTTGTGCC