Insertion junction: CLIP2.035581_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035581
Chromosome:chromosome 1
Location:824429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004600 RWP12 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATTCCCCCGCAGCCAATCGCGGCTTAAGAAGATATGCCGTCAGCAC
Internal bar code:ATATGCTATGGCTAATAGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCCCTACCTTGTAGCT
Suggested primer 2:CCCGATGCCTTTTATGCAGC