Insertion junction: CLIP2.035586_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035586
Chromosome:chromosome 13
Location:1653940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573800 (1 of 2) 2.4.2.9//2.7.1.48 - Uracil phosphoribosyltransferase / UMP pyrophosphorylase // Uridine kinase / Uridine monophosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGCCACCACGCTCGGTTGAGCCGACACTTCTACCCCGACGCCATT
Internal bar code:AATTGATGGGACGAAGAGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2425
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCTCGCAGCGATGTTAT
Suggested primer 2:GTGATCGTCGGTGACTGTGT