Insertion junction: CLIP2.035588_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035588
Chromosome:chromosome 9
Location:3890152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398030 (1 of 1) PF07744 - SPOC domain (SPOC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCCGCGAACAACGCCGCGCGGAGGTCAAGGCCATCTACGCCAACTAC
Internal bar code:CGTGCTGAAGATAAAACCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGAGGACCGGGATAAG
Suggested primer 2:TCATGTGGGGCACTCTGTTC