Insertion junction: CLIP2.035590_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035590
Chromosome:chromosome 2
Location:3345897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098000 EBM2 (1 of 4) K19355 - mannan endo-1,4-beta-mannosidase (MAN); Mannan endo-1%252C4-beta-mannosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTGCGAATCGATTTGAGACACGGGCATGTTCGTGTCGATGTGGAGG
Internal bar code:ACTTGTGCAACCATACAGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGAACATGACTCCGGC
Suggested primer 2:TCCTAGAAACGCACCCACAC