Insertion junction: CLIP2.035597_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035597
Chromosome:chromosome 6
Location:7009532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297150 RWP9 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGTGAAAACAGCGGTGGCCGCTCGTCCCAAATGCCTTTCAGCTGCTA
Internal bar code:CACCTTTCGTGCTGGGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGACGACTCTGACGATG
Suggested primer 2:AGAAGAAGGTGGCGGGATTG