Insertion junction: CLIP2.035603_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.035603
Chromosome:chromosome 8
Location:1849410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g367200 VPS52 (1 of 1) PF04129 - Vps52 / Sac2 family (Vps52); Subunit of GARP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCTGCGTGACGGTATGACACGCGTGCAGCTGACACGCCCCCCCCCC
Internal bar code:ACCGGGACGGGAAAGGGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGAGCGACAACATGGTT
Suggested primer 2:ATCCCTGGCTCCCTTACTGT