Insertion junction: CLIP2.035624_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035624
Chromosome:chromosome 13
Location:406999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCGCGGCGGCACCGGTGACGGCGGCGGCAGCGCCGGCGGCAGCGCC
Internal bar code:ACCCCGTGCCGGGGATGAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1082
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCGTTGCTGTTCACATG
Suggested primer 2:GCTTTAATGGCTGAAGGCGG