Insertion junction: CLIP2.035644_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035644
Chromosome:chromosome 4
Location:3018421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGTGTCGAGAGGGTGCGGGTGTGAACAGAGGGTGTGGTTACGTGTTT
Internal bar code:AGTGGGATCAATTGTACCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACCCAATCTACACCC
Suggested primer 2:AACATTCCCCAGCTCTCAGC