Insertion junction: CLIP2.035649_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035649
Chromosome:chromosome 5
Location:3000330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230800 (1 of 1) PF00176//PF07496 - SNF2 family N-terminal domain (SNF2_N) // CW-type Zinc Finger (zf-CW) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGAAGGGGGTGGCAGCAGCCGGGCGGAAGCGGCAGTGGCGGCGGCGG
Internal bar code:CTGAATAGAGTTGGCCAACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATCCGCATCATCGCTGT
Suggested primer 2:AAAACCCTAGGACAGCTGCC