Insertion junction: CLIP2.035649_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035649
Chromosome:chromosome 12
Location:1876349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512100 PIF1 (1 of 1) IPR003593//IPR003840//IPR010285//IPR013785//IPR027417 - AAA+ ATPase domain // DNA helicase // DNA helicase Pif1-like // Aldolase-type TIM barrel // P-loop containing nucleoside triphosphate hydrolase; {"PIF1-related DNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCACGATGTTCCGGCGCGCTCGGTGGCAGAGGCAGGCCTGGAGAAC
Internal bar code:TCGGGGGACGCCTGCACTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2854
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGCGAACAATGCAGTA
Suggested primer 2:TCTCCATGATGACGGATGCG