Insertion junction: CLIP2.035655_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.035655
Chromosome:chromosome 1
Location:1515883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008150 RPK1 RNA-polymerase-subunit kinase; (1 of 1) IPR000719//IPR001932//IPR002290//IPR011009 - Protein kinase domain // PPM-type phosphatase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGGTGTTGCAGGCTGTAGCTGTCCAGCGCCGACCCGAAGTCAATCAG
Internal bar code:CTCTGGGTGGGGGGCTTTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACACACACGCACACAC
Suggested primer 2:CTCCTCCCACACACTTCCAC