Insertion junction: CLIP2.035663_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035663
Chromosome:chromosome 9
Location:5491941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801072 (1 of 1) IPR026849//IPR026854 - Autophagy-related protein 2 // Vacuolar protein sorting-associated protein 13A, N-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTTTGGAAGAGCTGAGCTGGGGACGGAGGACTAGGCGGCGTCTGGCG
Internal bar code:TGGTATATAGAGGTGACAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3881
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGCTCAAGGACCTGCTG
Suggested primer 2:ATGTCTTGTGCAAAACCGCC