Insertion junction: CLIP2.035668_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035668
Chromosome:chromosome 4
Location:3498293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228000 (1 of 1) PF13890 - Rab3 GTPase-activating protein catalytic subunit (Rab3-GTPase_cat) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCTCTGGCCGCATCATGGCAGGACAGAGCCAGGGCTCCGAGAACGC
Internal bar code:GCTTGACCACTAGTTCTTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCTTTGGTGCCAGGTGC
Suggested primer 2:AGGTCAACACACGCTACAGG