Insertion junction: CLIP2.035675_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035675
Chromosome:chromosome 9
Location:258148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386756 (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAACGCTCAAATACACGTAGGGAGGTATTTTCACTGCTGGCGGCCAC
Internal bar code:ACGTCCAGGCTTGCGTTAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCCTCTGCCTCCTTCCAT
Suggested primer 2:CCAAGGAGCCCGTGTTGTAT